TogoVar data is downloadable at the links below.
- Variant frequencies of GEM Japan Whole Genome Aggregation (GEM-J WGA) panel [VCF format]
The GEM-J WGA panel is a variant frequency dataset of a Japanese general population, which was obtained by joint variant calling of whole genome sequence (WGS) data collected from 7,609 individuals across Japan. The WGS data is also available in a controlled access manner. They are the result of the GEnome Medical alliance Japan (GEM Japan) project.[More about the dataset][Download of the dataset]
- Variant frequencies of datasets except GEM-J WGA (i.e. JGA-NGS, JGA-SNP, 14KJPN, HGVD and gnomAD) [tab-separated format]
JGA-NGS and JGA-SNP are obtained by aggregating individual-level genomic data that have been registered in the NBDC Human Database / Japanese Genotype-phenotype Archive (JGA). [More about the datasets][Download of the datasets]